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发布于:2018-12-26 22:53:05  访问:68 次 回复:0 篇
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Ytosolic copy (Stairs et al. 2014). {Based on|According to|Depending on
incarcerata cultures doesn‘t include things like introns; on the other hand, it is also present in transcriptome information derived from the closely related jakobid XAV-939 buy Velundella trypanoides (Panek T and Cepicka I, personal communication), suggesting that it isn‘t a prokaryotic contaminant. Since Stygiella, like Blastocystis and Pygsuia, inhabits anoxic environments, it seems probably that its SufCB includes a related function. Like MROs of Trichomonas (Schneider et al. 2011), Pygsuia (Stairs et al. 2014), and Cantina (Noguchi et al. 2015), but as opposed to those of Giardia (Brown et al. 1995), S. incarceratametabolism; PubMed ID:https://www.ncbi.nlm.nih.gov/pubmed/23907221 brown, tyrosine metabolism; pale blue, lysine and tryptophan metabolism; green, arginine metabolism; purple, glutamate and proline metabolism; dark blue, leucine, isoleucine and valine (branched-chain amino acid) VE-821 MedChemExpress metabolism. For accession numbers, see supplementary table S5, Supplementary Material on the web.Gi ard ia int es Sp tin iro ali 1 nu s cle us Tri ch sa om lm on on ici as Py da va gs gi n ui a ali 3 bi f s Ca orm nti a4 na ma Sty rsu gi e pi a lla lis 5 i nc arc era taLeger et al. . doi:ten.1093/molbev/mswDeltaproteobacteria (12) Thermodesulfobacteria (two) Desulfobacca acetoxidans Firmicutes (2) Methanosarcinales (six) Synergistetes (two) 8 5/83.3 Methanomicrobiales (7) Blastocystis sp. NandII Blastocystis STMBE5 0/100 7 8/ 97.two 0.92/77.Stygiella incarcerata100/99.7 eight 7/98.four Chloroflexi (2) Thermodesulfovibrio yellowstonii Thermodesulfobium narugense Firmicutes (two) 98/99.9 Methanobacteriales (6) Methanococcales (4) Archaeglobales (four) Methanocellales (three) Methanosarcinales (two) Geobacter uraniire.Ytosolic copy (Stairs et al.Ytosolic copy (Stairs et al. 2014). Depending on phylogenetic research, the enzyme
Ytosolic copy (Stairs et al. 2014). Determined by phylogenetic studies, the enzyme was hypothesized to have been laterally acquired from an archaeon related to the Methanomicrobiales, and subsequently transferred laterally from 1 eukaryote to the other (Tsaousis, Ollagnier de Choudens, et al.Ytosolic copy (Stairs et al. 2014). Based on phylogenetic studies, the enzyme
Ytosolic copy (Stairs et al. 2014). Based on phylogenetic research, the enzyme was hypothesized to possess been laterally acquired from an archaeon associated with the Methanomicrobiales, and subsequently transferred laterally from one particular eukaryote towards the other (Tsaousis, Ollagnier de Choudens, et al. 2012; Stairs et al. 2014). We recovered a sequence encoding a homolog of this enzyme from our transcriptome information. The S. incarcerata enzyme displays the exact same fusion of the prokaryotic SufC and SufB proteins as those identified in Blastocystis sp. and P. biforma; the enzyme lacks a targeting peptide, suggesting that it really is cytosolic (supplemen tary table S3, Supplementary Material on-line). The genomic sequence with the enzyme that we amplified from S. incarcerata cultures does not include introns; on the other hand, it is also present in transcriptome information derived from the closely associated jakobid Velundella trypanoides (Panek T and Cepicka I, private communication), suggesting that it isn‘t a prokaryotic contaminant. Since the fusion protein has only been identified in Blastocystis, Pygsuia, and S. incarcerata, we initially performed separate phylogenetic analyses of SufC and SufB in prokaryotes and eukaryotes (supplementary figs. S8 and S9, Supplementary Material on the web). The two analyses recovered broadly congruent benefits. We then performed analyses applying concatenated SufC and SufB.
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